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Ph.D. PROGRAMME
 
IOB has been recognized as Scientific and Industrial Research Organization (SIRO) by Department of Scientific and Industrial Research (DSIR), India. The Faculty at IOB are recognized as Ph.D. guides by Manipal University in Manipal and Kuvempu University in Shimoga. IOB currently has 12 Ph.D. scientists, 29 registered Ph.D. students and 15 students whose Ph.D. registrations underway with Manipal University or Kuvempu University or Amrita Vishwa Vidhyapeetham or Rajiv Gandhi University of Health Sciences or Pondicherry University or KIIT University. Because of a close collaboration of IOB with the Johns Hopkins University, 3 Ph.D. students and a Faculty scientists are carrying out their research work in Dr. Akhilesh Pandey's laboratory at the McKusick-Nathans Institute of Genetic Medicine at Johns Hopkins University.

Current Ph.D. Students

  Students University Title
1 Santosh Renuse Amrita Vishwa Vidhyapeetham Proteomics profiling of Pichia pastoris, a widely used yeast for protein expression
2 Aneesha Radhakrishnan Pondicherry University Phosphoproteomic analysis of head and neck cancer
3 Babylakshmi Muthusamy Pondicherry University Next generation sequencing for analysis of inherited genetic disorders
4 Nirujogi Raja Sekhar Pondicherry University Proteogenomic analysis of Neurospora crassa.
5 Joji Kurian Thomas Amrita Vishwa Vidyapeetham Pancreatic Cancer Database
6 Vishalakshi Nanjappa Amrita Vishwa Vidyapeetham Identification of smokeless tobacco induced signaling in oral cancer
7 Srinivas M. Srikanth Pondicherry University Analyzing human genomes from Next-Generation Sequencing platforms
8 Tejaswini Subbannayya Amrita Vishwa Vidyapeetham Phosphoproteome analysis in gallbladder cancer
9 Nazia Syed Pondicherry University Phosphoproteomic analysis of gastric cancer
10 Apeksha Sahu Pondicherry University Identification of novel protein antigens of Salmonella enterica serovar Typhi from blood and urine of typhoid patients
11 Sartaj Ahmad Manipal University Phosphoproteomics analysis of arscenic induced signaling in human skin keratinocytes
12 Gajanan J. Sathe Manipal University Phosphoproteomics analysis of curcumin induced signaling in head and neck cancer
13 Sandip Chavan Manipal University Proteomic analysis of head and neck cancer
14 Manoj Kumar Gupta Manipal University Altered microRNAs and molecular effects in Glioblastoma
15 Savita Jayaram Manipal University Altered signaling pathways and processes in Glioblastoma Multiforme - A Bioinformatics study
16 Keshava K. Datta KIIT Unversity Tobacco induced molecular aberrations in esophageal squamous cells
17 Pavithra Rajagopalan KIIT Unversity Effect of cigarette smoke on oral keratinocytes
18 Soujanya D. Yelamanchi KIIT Unversity Phosphoproteomic analysis of cryptococcal meningitis
19 Renu Verma KIIT Unversity Analysis of Mycobacterium tuberculosis antigens
20 Gourav Dey Manipal University Mass spectrometry-driven genome annotation of Anopheles stephensi Liston, a major malaria vector in India
21 Sreelakshmi K. Sreenivasamurthy Manipal University Integrated transcriptomic and proteomic analysis of the Indian malaria vector - Anopheles stephensi
22 Manish Kumar Manipal University Proteomic analysis of fat body of Anopheles stephensi Liston, using high-resolution mass spectrometry
23 Anil Kumar Madugundu Pondicherry University Integrated analysis of transcriptomic and proteomic data
24 Jayshree Advani Manipal University Whole genome sequencing analysis of Mycobacterium tuberculosis clinical isolates from India
25 Aafaque Ahmad Khan KIIT University Cigarette smoke induced molecular alterations in esophageal cells
26 Ankit P. Jain KIIT University Molecular mechanisms that govern erlotinib resistance in HNSCC
27 Hitendra Singh Solanki KIIT University Cigarette smoke-induced molecular alterations in lung cells
28 Arun H. Patil KIIT University Bioinformatics based analysis of Next-generation sequencing data in inherited genetic disorders

Past Ph.D. Students

  Name Position Current address
1 Dr. Suresh Mathivanan Postdoctoral Fellow Laboratory of Dr. Richard Simpson, Ludwig Institute for Cancer Research, Melbourne, Australia
2  Dr. Shreeharsha Gowda  Wellcome Trust-DBT Early Career Research Fellow Institute of Bioinformatics, Discoverer Building, 7th Floor, International Tech Park, Whitefield, Bangalore - 560 066 Karnataka, India.
3 Dr. Shivakumar Keerthikumar  Postdoctoral Fellow Center for Molecular and Biomolecular Informatics, Nijmegen Center for Molecular Life Sciences,
Radboud University Nijmegen Medical Centre,
Nijmegen, The Netherlands
4  Dr. Kumaran Kandasamy  Postdoctoral Fellow Laboratory of Prof. Giulio Superti-Furga
Research Center for Molecular Medicine
of the Austrian Academy of Sciences
Vienna, Austria
5  Dr. Manoj Kumar Kashyap  Postdoctoral Fellow University of California, San Diego.
6  Dr. Rajesh Raju  Postdoctoral Fellow Institute of Bioinformatics, Discoverer Building, 7th Floor, International Tech Park, Whitefield, Bangalore - 560 066 Karnataka, India.
7  Dr. Arivusudar Marimuthu  Postdoctoral Fellow Institute of Bioinformatics, Discoverer Building, 7th Floor, International Tech Park, Whitefield, Bangalore - 560 066 Karnataka, India.
8  Dr. Charles Jacob Harrys Kishore  Postdoctoral Fellow The National Cancer Research Centre (CNIO).Spain
9 Dr. Deepthi Telikicherla  Postdoctoral Fellow St Johns Hospital, Bangalore.
10 Dr. Sameer Kumar  Postdoctoral Fellow Centre for Cellular and Molecular Biology, Hyderabad.
11 Dr. Ravindra Varma Polisetty Postdoctoral Fellow National Institute of Pathology, Delhi.
12 Dr. Nandini V. Patankar Postdoctoral Fellow Institute of Bioinformatics, Bangalore. 
13 Dr. Abhilash Venugopal  Postdoctoral Fellow National Cancer Institute (NCI), U.S.A.
14 Dr. Mitali Bhattacharjee  - -
15 Dr. Dhanashree S. Kelkar - -
16 Dr. Renu Goel - -
17 Dr. Sneha M. Pinto - -
18 Dr. Yashwanth Subbannayya - -
19 Dr. Harsh A. Pawar - -
20 Dr. Lakshmi Dhevi Nagarajha Selvan - -
21 Dr. Sutopa B. Dwivedi - -
22 Dr. Lavanya Balakrishnan - -
23 Dr. Jyoti Sharma - -
 
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