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Raghothama, C., Harsha, H. C., Prasad, C. K. and Pandey, A.
Bioinformatics and proteomics approaches for aging research. Biogerontology. 6, 227-232.
[PubMed]
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Gronborg, M. Kristiansen, T. Z., Iwahori, A., Chang, R., Reddy, R., Sato, N., Molina, H.,
Jensen, O. N., Hruban, R.H., Goggins, M. G., Maitra, A. and Pandey, A.
Biomarker discovery from pancreatic cancer secretome using a differential proteomics approach. Molecular and
Cellular Proteomics. 5, 157-171.
[PubMed]
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Rhodes, D. R., Tomlins, S. A., Varambally, S., Mahavisno, V., Barrette, T.,
Kalyana-Sundaram, S., Ghosh, D., Pandey, A. and Chinnaiyan, A. M.
Probabilistic model of the human protein-protein interaction network.
Nature Biotechnology. 23, 951-959. [PubMed]
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Haab, B. B., Geierstanger, B. H., Michailidis, G., Vitzthum,
F., Forrester, S., Okon, R., Saviranta, P., Brinker, A., Sorette, M., Perlee,
L., Suresh, S., Drwal, G., Adkins, J. N., Omenn, G. S. Immunoassay and antibody
microarray analysis of the HUPO Plasma Proteome Project reference specimens:
Systematic variation between sample types and calibration of mass spectrometry
data. Proteomics. 5, 3278-3291. [PubMed]
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Kalume, D. E., Peri, S., Zhong, J., Okulate, M., Reddy, R., Humar, N.
and Pandey, A. Genome Annotation of Anopheles gambiae using Mass
Spectrometry-derived Data. BMC Genomics. 6, 128. [PubMed]
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Suresh, S., Mohan, S., Mishra, G., Hanumanthu, G., Suresh, M., Reddy,
R. and Pandey, A. Proteomic resources: Integrating biomedical information
in humans. Gene. 364, 13-18.
[PubMed]
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Muthusamy, B., Hanumanthu, G., Reshmi, R., Sriranjini, S., Suresh, S.,
Rekha, B., Srinivas, D., Karthick, L., Vrushabendra, B. M., Sharma, S.,
Mishra, G., Rashmi, B. P., Kadekar, S., Chatterjee, P., Mangala, K. S.,
Shivashankar, H. N., Chandrika, K. N., Deshpande, N., Suresh, M., Kannabiran,
N., Niranjan, V., Nalli, A., Prasad, T. S. K., Arun, K. S., Reddy, R.,
Chandran, S., Jadhav, T., Julie, D., Mahesh, M., John, S. L., Palvankar,
K., Sudhir, D., P. Bala., Jithesh, M. K., Rashmi, N. S., Vishnupriya,
G., Dhar, K., Reshma, S., Raghothama, C., Prasad, C. K., Gandhi, T. K.
B., Harsha, H. C., Mohan, S. S., Deshpande, K.S., Sarker, M. and Pandey,
A. Plasma Proteome Database as a resource for proteomics research. Proteomics.
5, 3531-3536.
[PubMed]
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Ping, P., Vondriska, T. M., Creighton, C. J., Gandhi, T. K. B., Yang,
Z., Menon, R., Kwon, M. S., Cho, S. Y., Drwal, G., Kellmann, M., Peri,
S., Suresh, S., Gronborg, M., Molina, H., Chaerkady, R., Rekha, B., Muthusamy,
B., Shet, A. S., Gerszten, R. E., Wu, H., Raftery, M., Wasinger, V., Schulz-Knappe,
P., Hanash, S. M., Paik, Y. K., Hancock, W. S., States, D. J., Omenn,
G. S. and Pandey, A. A functional annotation of subproteomes in human
plasma. Proteomics. 5, 3506-3519.
[PubMed]
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Harsha, H.C., Suresh, S., Amanchy, R., Deshpande, N., Shanker, K., Yatish,
A.J., Muthusamy, B., Vrushabendra, B.M., Rashmi, B.P., Chandrika, K.N.,
Padma, N., Sharma, S., Badano, J. L., Ramya, M.A., Shivashankar, H.N.,
Peri, S., Choudhury, D.R., Kavitha, M.P., Saravana, R., Niranjan, V.,
Gandhi, T.K.B., Ghosh, N., Chandran, S., Menezes, M., Joy, M., Mohan,
S. S., Katsanis, N., Deshpande, K.S., Raghothama, C., Prasad, C.K., and
Pandey, A. A manually curated functional annotation of the human X chromosome.
Nature Genetics. 37, 331-332. [PubMed]
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Bala, P., Georgantas, R. W., Sudhir, D., Suresh, M., Shanker, K., Vrushbendra,
B. M., Civin, C. I., and Pandey, A. TAGmapper: A web-based tool for mapping
SAGE tags. Gene. 364, 123-129. [PubMed]
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Gandhi, T.K.B., Chandran, S., Peri, S., Saravana, R., Amanchy, R., Prasad,
T.S.K and Pandey, A. A bioinformatics analysis of protein tyrosine phosphatases
in humans. DNA Research. 12, 79-89. [PubMed]
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Kalume, D. E., Okulate, M., Zhong, J., Reddy, R., Suresh. S., Deshpande,
N., Kumar, N. and Pandey, A. A proteomic analysis of salivary glands of
female Anopheles gambiae mosquito. Proteomics. 5, 3765-3777. [PubMed]
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Molina, H., Bunkenborg, J., Reddy, G. H., Muthusamy, B., Scheel, P. J.
and Pandey, A. A proteomic analysis of human hemodialysis fluid. Molecular
and Cellular Proteomics. 4, 637-650. [PubMed]
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